Where and how to store data on-line? - Spectrometry

MassIVE (Mass spectrometry Interactive Virtual Environment)

  • Field(s) Spectrometry
  • Website https://massive.ucsd.edu/ProteoSAFe/static/massive.jsp
  • Carrier institution Center for Computational Mass Spectrometry (University of California in San Diego) financed by the National Institute of Health (NIH).
  • Link to publications

    Not mandatory.

  • Certification None
  • Perennial ID No
  • License

    CC0 1.0 license by default.
    The depositor can also choose another license and specify it in a special license file.

  • Possibility of embargo

    Data sets are private by default. They do not appear in a public database. A precise URL and password are required for access.
    Only the data owner can choose whether to make the data public.

  • Metadata standard

    For MassIVE, certain metadata fields must be completed (more information in their documentation and in the following path: MassIVE > Submit Data to MassIVE > Dataset Submission Workflow)

  • Versioning Non
  • Type of data

    Data submissions on MassIVE must include at least one peak list file (processed mass spectrum file – mzXML, mzML or MGF files) or a raw spectrum file (non-standard or instrumentation-specific).
    More details in documentation (path: MassIVE > Submit Data to MassIVE > Dataset Submission Workflow > Submission File Categories)

  • Related Services

    Data sets are checked automatically when deposited.

  • Volume No restrictions
  • Cost Free
  • Comments

    An account is required for data deposits.

  • Contacts

    ccms-web@cs.ucsd.edu